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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
BLCA rs1397480 chr8:25090069 C/T FAM160B2 chr8:21946670-21962409:+ -0.71 -6.07 3.15E-9 Box Plot
BLCA rs1397480 chr8:25090069 C/T GTF2E2 chr8:30435835-30515768:- -0.95 -7.17 3.89E-12 Box Plot
BLCA rs1397480 chr8:25090069 C/T INTS9 chr8:28625178-28747759:- -0.9 -6.42 3.94E-10 Box Plot
BLCA rs1397480 chr8:25090069 C/T KIAA1967 chr8:22462257-22477981:+ -0.82 -6.02 4.02E-9 Box Plot
BLCA rs1397480 chr8:25090069 C/T PPP2R2A chr8:26149007-26230196:+ -0.83 -6.52 2.23E-10 Box Plot
BLCA rs1397480 chr8:25090069 C/T R3HCC1 chr8:23127633-23153792:+ -0.74 -6.05 3.43E-9 Box Plot
BLCA rs139987743 chr1:165929039 ATACT/A DPYSL2 chr8:26371538-26515694:+ 0.35 5.96 5.75E-9 Box Plot
BLCA rs140070602 chr1:4804382 AT/A KRTAP13-1 chr21:31768392-31769140:+ 0.16 6.8 4.01E-11 Box Plot
BLCA rs140104448 chr11:77641481 A/G INTS4L1 chr7:64601603-64694600:+ 0.49 6.68 8.27E-11 Box Plot
BLCA rs140130145 chr6:130468118 CAAAA/C JAK1 chr1:65298912-65432187:- 0.54 6.19 1.53E-9 Box Plot
BLCA rs140507 chr22:23646512 C/T POM121L10P chr22:25053448-25054732:- 0.69 13.42 6.14E-34 Box Plot
BLCA rs140617195 chr4:163961231 TG/T KRTAP13-1 chr21:31768392-31769140:+ 0.19 6.08 2.9E-9 Box Plot
BLCA rs1407045 chr6:26476155 A/G ZNF322B chr9:99957633-99961910:- 0.41 6.81 3.89E-11 Box Plot
BLCA rs140825496 chr5:99629648 A/AT CT47A9 chrX:120077415-120080737:- 0.22 6.65 1.02E-10 Box Plot
BLCA rs140831443 chr1:35838320 CTGAT/C KRTAP13-1 chr21:31768392-31769140:+ 0.19 6.39 4.76E-10 Box Plot